BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035H06SP1|AL430131
(916 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1042 1603 0.0
>3x_Contig1042
Length = 3616
Score = 1603 bits (800), Expect = 0.0
Identities = 887/914 (97%), Gaps = 9/914 (0%)
Strand = Plus / Minus
Query: 3 attttttgttttataagtaaactacacgtttgttacacactaagaaagctgaaaggctaa 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1782 attttttgttttataagtaaactacacgtttgttacacactaagaaagctgaaaggctaa 1723
Query: 63 ttatgccaaaaccgtcaatacctwctcatagatggtgaagacaataccaccagaaaagat 122
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 1722 ttatgccaaaaccgtcaataccttctcatagatggtgaagacaataccaccagaaaggat 1663
Query: 123 caatactacccaatcttagagtagcacctttmcagaaagtcttcaaaccttcctccttga 182
|||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1662 caat-ctacccaatcttggagtagcacctttccagaaagtcttcaaaccttcctccttga 1604
Query: 183 aaatggtagcgaaacagtwaatagtagaagaatattggcctgcatatcaaagattgaatt 242
|||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||
Sbjct: 1603 aaatggtagcgaaacagttaatagtagaagaatattggcctgcat-tcaaagattgcatt 1545
Query: 243 cttgatcttaacggtatcgataggcattgtcgtataaacggtaacgataccactgaaggc 302
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1544 cttg-tcttaacggtatcgataggcattgtcgtataaacggtaacgataccactgaaggc 1486
Query: 303 acctacaatgaaggtcaaacctgaacwcaaaggtttatccttagagtacgtttgtgtaat 362
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 1485 acctacaatgaaggtcaaacctgaactcaaaggtttatccttag-gtacgtttgtgtaat 1427
Query: 363 cttgcaccaaagtcttgatcttgtwawaacaacccaatctaacggcttgatttgcagctt 422
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 1426 cttgcaccaaagtcttgatcttgttataacaacccaatctaacggcttgatttgcagctt 1367
Query: 423 gtctcatggaaactggtaagacacctctataaagamcagaaaatccttgatcggataaaa 482
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1366 gtctcatggaaactggtaagacacctctataaagaccagaaaatccttgatcggataaaa 1307
Query: 483 rcttagcataattgctcaccatacctttcccgttattttgatattttggcacagcagctt 542
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1306 gcttagcataattgctcaccatacctttcccgttattttgatattttggcacagcagctt 1247
Query: 543 gcttatcatcgatcaatgcagtcttgatggcttcgaatggagtcacagccacgaccgatt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1246 gcttatcatcgatcaatgcagtcttgatggcttcgaatggagtcacagccacgaccgatt 1187
Query: 603 ccaacaaacctgcacactaacccggcacacacacacmtctaaatcmamtcaactcaccgg 662
||||||||||||||| ||||||||||| ||| |||| |||||||| | ||||||||||||
Sbjct: 1186 ccaacaaacctgcac-ctaacccggca-aca-acacctctaaatccactcaactcaccgg 1130
Query: 663 tcttcttgtctcgaagcaagtkcttgattgtgtcgaacccaagaaatctaatacmggcct 722
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 1129 tcttcttgtctcgaagcaagttcttgattgtgtcgaacccaagaaatctaataccggcct 1070
Query: 723 ttgctgtgttaccaacgatgaaagctggacaaccgacgtaaatggatgaaataccgyagt 782
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1069 ttgctgtgttaccaacgatgaaagctggacaaccgacgtaaatggatgaaataccgtagt 1010
Query: 783 tcttacccgtattgtatattagaaccaatggatttctggaagctttactagccttatcca 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1009 tcttacccgtattgtatattagaaccaatggatttctggaagctttactagccttatcca 950
Query: 843 ccaactgtaacctcgcttttggcaaactcgmaaggataagtgatggaggcttctattagc 902
||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 949 ccaactgtaacctcg-ttttggcaaactcgaaaggataagtgatggaggcttcta-tagc 892
Query: 903 acctgcgattgatc 916
||||||||||||||
Sbjct: 891 acctgcgattgatc 878
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5801
Number of Sequences: 1807
Number of extensions: 5801
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 916
length of database: 10,358,551
effective HSP length: 16
effective length of query: 900
effective length of database: 10,329,639
effective search space: 9296675100
effective search space used: 9296675100
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)